CDS

Accession Number TCMCG057C02858
gbkey CDS
Protein Id XP_018489486.1
Location complement(join(14254708..14254801,14254901..14254983,14255089..14255244,14255360..14255495,14255574..14255725,14255815..14255904,14255989..14256162))
Gene LOC108860039
GeneID 108860039
Organism Raphanus sativus

Protein

Length 294aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018633984.1
Definition PREDICTED: coatomer subunit epsilon-1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category U
Description The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
KEGG_ko ko:K17268        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005774        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005798        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006888        [VIEW IN EMBL-EBI]
GO:0006890        [VIEW IN EMBL-EBI]
GO:0006891        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0012506        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0030117        [VIEW IN EMBL-EBI]
GO:0030120        [VIEW IN EMBL-EBI]
GO:0030126        [VIEW IN EMBL-EBI]
GO:0030135        [VIEW IN EMBL-EBI]
GO:0030137        [VIEW IN EMBL-EBI]
GO:0030659        [VIEW IN EMBL-EBI]
GO:0030660        [VIEW IN EMBL-EBI]
GO:0030662        [VIEW IN EMBL-EBI]
GO:0030663        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044431        [VIEW IN EMBL-EBI]
GO:0044433        [VIEW IN EMBL-EBI]
GO:0044437        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048193        [VIEW IN EMBL-EBI]
GO:0048475        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCATCCATGGCGGCAGGACCAGATCACCTCTTTAATCTGAGAAACAGTTTTTACCTAGGTGCGTATCAAGCGGCGATCAACAACAGCGAGATCCCTAATCTCTCGCAGGAAGATATCATCGAGCGTGATTGCCTCGTCCACCGCGCTTACATCGCTCTTGGTAGCTACCAGCTTGTCATCAATGAGATCGACGAAGCGTCGGCTACTCCTCTTCAAGCAGTGAAGCTCCTCGCTATGTATCTATCGAGCCCTGAGAATAAGGAATCAACGATTGCTAGCTTGAGGGAATGGTTGGCAGATCCAACTGCTGGAAACAATGCTACTGTTAGGTTGATTGCTGGTACTATCTTCATGCATGAGGAAGACTATAGCGAGGCTCTCAAGCACACTCATTCTGGAGGAACTATGGACCTACATGCTTTGAATGTCCAGATATTCATAAAGATGCACAGGTCAGATTATGCTGAGAAACAGCTGAGAGTGATGCAACAGTTTGATGAAGACCACACACTCACTCAACTCGCCAGTGCATGGTTGAACCTGGCAGTAGGGGGTTCCAAGATACAAGAAGCTTATCTAATCTTCCAGGATTTCTCTGAGAAGTACCCAATGACAAGCTTGATCTTGAACAGCAAGGCGGTTTGTTGCATGCATATGGGTAACTTTGAAGAAGCTGAGACTCTTCTGCTTGAAGCACTCAATAAGGATGCGAAAGACCCAGAAACTCTTGCAAACTTAGTTGTGTGCAGTATTCATGTGGTGAAACAATCATCATCACGTTACCTAAGCCAGCTGAAACTGTCGCATCCAGAGCATGTACTTGTGAAGCGAGCAGCCTCTGCTGAAGATAACTTCGAGAGAGCGCTTCAATCTTTAGCCTGA
Protein:  
MASMAAGPDHLFNLRNSFYLGAYQAAINNSEIPNLSQEDIIERDCLVHRAYIALGSYQLVINEIDEASATPLQAVKLLAMYLSSPENKESTIASLREWLADPTAGNNATVRLIAGTIFMHEEDYSEALKHTHSGGTMDLHALNVQIFIKMHRSDYAEKQLRVMQQFDEDHTLTQLASAWLNLAVGGSKIQEAYLIFQDFSEKYPMTSLILNSKAVCCMHMGNFEEAETLLLEALNKDAKDPETLANLVVCSIHVVKQSSSRYLSQLKLSHPEHVLVKRAASAEDNFERALQSLA